Table 1 Three major groups of radiomics tools were identified: (top to bottom) programming libraries and command-line executables (typically) limited to a narrow set of functionalities focused on radiomics feature extraction; toolkits bundling multiple functionalities for radiomics workflows; advanced applications providing additional functionality for radiomics analyses
Name | Type | Imaging | Cohort | Radiomics features | Prediction modeling | |||||
|---|---|---|---|---|---|---|---|---|---|---|
DICOM | Segmentation | Management | Extraction | Visualization | Selection | Training | Evaluation | Management | ||
PyRadiomics | Library | -- | Â | Â | X(c) | Â | Â | Â | Â | Â |
moddicom | Library | X | Â | Â | X | Â | Â | Â | Â | Â |
RADIOMICS | Llibrary | X | Â | Â | X | Â | Â | Â | Â | Â |
PORTS | Library | -- | Â | Â | X | Â | Â | Â | Â | Â |
ROdiomiX | cmd-exec | X | Â | Â | X(d) | Â | Â | Â | Â | Â |
SERA | Library/cmd-exec | -- | Â | Â | X(c) | Â | Â | Â | Â | Â |
QIFE | Library/cmd-exec | X | Â | Â | X(c) | Â | Â | Â | Â | Â |
MIRP | Library | X | Â | Â | X(c) | Â | Â | Â | Â | Â |
RaCaT | cmd-exec | X | Â | Â | X | Â | Â | Â | Â | Â |
Precision-medicine-toolbox | Library | X | Â | txt/xlsx file | PyRadiomics | Cohort | Â | X | X | Â |
LIFEx | GUI(a) | X(b) | X | Â | X(c) | Feature map | Â | Â | Â | Â |
IBEX | GUI | X | X | Â | X | -- | Â | Â | Â | Â |
CERR | GUI (plugin) | X | X | Â | X(c) | Feature map | Â | Â | Â | Â |
MRP | GUI (plugin) | X | X | Â | X | -- | Â | Â | Â | Â |
MITK Phenotyping | GUI (plugin) | X | X | Â | X(c) | -- | Â | Â | Â | Â |
SlicerRadiomics | GUI (plugin) | X | X | Â | PyRadiomics | -- | Â | Â | Â | Â |
CGITA | GUI (plugin) | X(b) | X | Â | X | -- | Â | Â | Â | Â |
QuantImage (v1) | GUI (web) | X(b) | -- | Â | X | -- | Â | Â | Â | Â |
ePAD | GUI (web) | X(b) | X | Â | QIFE | Feature map | Â | Â | Â | Â |
MaZda/b11 | GUI | -- | X | txt file | X | Feature map | Automated | X | -- | -- |
CaPTk | GUI | X(b) | X | txt file | X(c) | Feature map | -- | X | X | Folder based |
AutoRadiomics | GUI (web) | X | X | txt file | X(c) | Feature map | Automated | X | X | X |
QuantImage v2 | GUI (web) | X(b) | -- | Web based | X(c) | Cohort | Interactive | X | X | X |